{"id":2571,"date":"2020-02-07T11:19:25","date_gmt":"2020-02-07T19:19:25","guid":{"rendered":"https:\/\/research.wsu.edu\/advancement\/?post_type=tribe_events&#038;p=2571"},"modified":"2020-02-07T12:14:04","modified_gmt":"2020-02-07T20:14:04","slug":"ncbi-pathogen","status":"publish","type":"tribe_events","link":"https:\/\/research.wsu.edu\/advancement\/event\/ncbi-pathogen\/","title":{"rendered":"NCBI Functional Genomics Workshop &#8211; 9a-12p"},"content":{"rendered":"<p><span style=\"font-size: 14pt;\"><strong>NCBI Resources for Pathogen (Bacteria &amp; Virus) Genomics Research<\/strong><\/span><\/p>\n<p>In this workshop, you will learn to use NCBI resources to search, access, and analyze animal and plant pathogen (bacteria and virus) data from individual isolates and metagenomes.\u00a0 You will explore some general resources for all organisms, as well as some newly developed resources for bacteria and viruses. In addition, you will briefly see how to access and analyze data using standalone tools, such as the SRA Toolkit and Magic-BLAST.Specifically, you will learn to:<\/p>\n<ul>\n<li style=\"list-style-type: none;\">\n<ul>\n<li>Find, browse, and download genome-, gene-, protein- and sequence read-level data for individual bacterial and viral pathogens and metagenomes<\/li>\n<li>Access and display precomputed genome analyses and perform your own analyses of assembled and unassembled genomic data to identify organisms and genes<\/li>\n<li>Find sequences, variants, antibiotic resistance genes using BLAST services, including SRA-BLAST<\/li>\n<li>Explore the new and developing NCBI Virus and Pathogen Detection Project resources.<\/li>\n<\/ul>\n<\/li>\n<\/ul>\n<p><strong><a href=\"https:\/\/research.wsu.edu\/advancement\/ncbi-workshop\/\"><span style=\"font-size: 14pt;\">RSVP and learn about other session at: https:\/\/research.wsu.edu\/advancement\/ncbi-workshop\/<\/span><\/a><\/strong><\/p>\n","protected":false},"excerpt":{"rendered":"<p>NCBI Resources for Pathogen (Bacteria &amp; Virus) Genomics Research In this workshop, you will learn to use NCBI resources to search, access, and analyze animal and plant pathogen (bacteria and [&hellip;]<\/p>\n","protected":false},"author":3530,"featured_media":0,"comment_status":"open","ping_status":"closed","template":"","meta":{"_tribe_events_status":"","_tribe_events_status_reason":""},"tags":[586,584,510],"tribe_events_cat":[],"wsuwp_university_location":[332],"wsuwp_university_org":[411,506],"event_city":"","event_state":"","event_venue":"Holland Terrell Library 20E","event_organizer":"Office of Research","event_organizer_email":"","event_organizer_phone":"","event_organizer_website":"","event_website":"","event_cost":"","event_excerpt":"NCBI Resources for Pathogen (Bacteria &amp; Virus) Genomics Research\nIn this workshop, you will learn to use NCBI resources to search, access, and analyze animal and plant pathogen (bacteria and virus) data from individual isolates and metagenomes.\u00a0 You will explore some general resources for all organisms, as well as some newly developed resources for bacteria and viruses. In addition, you will briefly see how to access and analyze data using standalone tools, such as the SRA Toolkit and Magic-BLAST.Specifically, you will learn to:\n\n\n\nFind, browse, and download genome-, gene-, protein- and sequence read-level data for individual bacterial and viral pathogens and metagenomes\nAccess and display precomputed genome analyses and perform your own analyses of assembled and unassembled genomic data to identify organisms and genes\nFind sequences, variants, antibiotic resistance genes using BLAST services, including SRA-BLAST\nExplore the new and developing NCBI Virus and Pathogen Detection Project resources.\n\n\n\nRSVP and learn about other session at: https:\/\/research.wsu.edu\/advancement\/ncbi-workshop\/","start_date":"2020-04-16 09:00:00","end_date":"2020-04-16 12:00:00","_links":{"self":[{"href":"https:\/\/research.wsu.edu\/advancement\/wp-json\/wp\/v2\/events\/2571"}],"collection":[{"href":"https:\/\/research.wsu.edu\/advancement\/wp-json\/wp\/v2\/events"}],"about":[{"href":"https:\/\/research.wsu.edu\/advancement\/wp-json\/wp\/v2\/types\/tribe_events"}],"author":[{"embeddable":true,"href":"https:\/\/research.wsu.edu\/advancement\/wp-json\/wp\/v2\/users\/3530"}],"replies":[{"embeddable":true,"href":"https:\/\/research.wsu.edu\/advancement\/wp-json\/wp\/v2\/comments?post=2571"}],"version-history":[{"count":2,"href":"https:\/\/research.wsu.edu\/advancement\/wp-json\/wp\/v2\/events\/2571\/revisions"}],"predecessor-version":[{"id":2579,"href":"https:\/\/research.wsu.edu\/advancement\/wp-json\/wp\/v2\/events\/2571\/revisions\/2579"}],"wp:attachment":[{"href":"https:\/\/research.wsu.edu\/advancement\/wp-json\/wp\/v2\/media?parent=2571"}],"wp:term":[{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/research.wsu.edu\/advancement\/wp-json\/wp\/v2\/tags?post=2571"},{"taxonomy":"tribe_events_cat","embeddable":true,"href":"https:\/\/research.wsu.edu\/advancement\/wp-json\/wp\/v2\/tribe_events_cat?post=2571"},{"taxonomy":"wsuwp_university_location","embeddable":true,"href":"https:\/\/research.wsu.edu\/advancement\/wp-json\/wp\/v2\/wsuwp_university_location?post=2571"},{"taxonomy":"wsuwp_university_org","embeddable":true,"href":"https:\/\/research.wsu.edu\/advancement\/wp-json\/wp\/v2\/wsuwp_university_org?post=2571"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}