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X-WR-CALNAME:Advancement & Strategy
X-ORIGINAL-URL:https://research.wsu.edu/advancement
X-WR-CALDESC:Events for Advancement & Strategy
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DTSTART;TZID=America/Los_Angeles:20200416T130000
DTEND;TZID=America/Los_Angeles:20200416T160000
DTSTAMP:20260418T083526
CREATED:20200207T192206Z
LAST-MODIFIED:20200207T201501Z
UID:10000383-1587042000-1587052800@research.wsu.edu
SUMMARY:Resources for Gene Expression and Genetic Variation Research - NCBI Functional Genomics Workshop - 1p-4p
DESCRIPTION:NCBI Resources for Gene Expression and Genetic Variation Research \n  \nThis workshop focuses on NCBI’s web-based resources for accessing gene expression and genetic variation data for non-human organisms. You will learn about NCBI’s gene expression databases\, including Gene\, GEO\, and SRA. You will learn how you can leverage SRA data for your gene expression and genetic variation analyses. We will also briefly discuss NCBI’s analysis and stand-alone tools\, such as GEO2R\, the Genome Data Viewer (GDV)\, SRA Toolkit and Magic-BLAST.In this workshop you will learn how to: \n\nFind gene-specific expression data in Gene and GEO databases\nFind and explore experimental study information in the GEO database\nAccess and analyze SRA data\nUse GDV as a variant analysis tool\n\nRSVP and learn about other sessions at: https://research.wsu.edu/advancement/ncbi-workshop/
URL:https://research.wsu.edu/advancement/event/ncbi-gene-expression/
LOCATION:Holland Terrell Library 20E
CATEGORIES:Workshops and Seminars
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20200416T090000
DTEND;TZID=America/Los_Angeles:20200416T120000
DTSTAMP:20260418T083526
CREATED:20200207T191925Z
LAST-MODIFIED:20200207T201404Z
UID:10000384-1587027600-1587038400@research.wsu.edu
SUMMARY:NCBI Functional Genomics Workshop - 9a-12p
DESCRIPTION:NCBI Resources for Pathogen (Bacteria & Virus) Genomics Research \nIn this workshop\, you will learn to use NCBI resources to search\, access\, and analyze animal and plant pathogen (bacteria and virus) data from individual isolates and metagenomes.  You will explore some general resources for all organisms\, as well as some newly developed resources for bacteria and viruses. In addition\, you will briefly see how to access and analyze data using standalone tools\, such as the SRA Toolkit and Magic-BLAST.Specifically\, you will learn to: \n\n\n\nFind\, browse\, and download genome-\, gene-\, protein- and sequence read-level data for individual bacterial and viral pathogens and metagenomes\nAccess and display precomputed genome analyses and perform your own analyses of assembled and unassembled genomic data to identify organisms and genes\nFind sequences\, variants\, antibiotic resistance genes using BLAST services\, including SRA-BLAST\nExplore the new and developing NCBI Virus and Pathogen Detection Project resources.\n\n\n\nRSVP and learn about other session at: https://research.wsu.edu/advancement/ncbi-workshop/
URL:https://research.wsu.edu/advancement/event/ncbi-pathogen/
LOCATION:Holland Terrell Library 20E
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20200415T130000
DTEND;TZID=America/Los_Angeles:20200415T160000
DTSTAMP:20260418T083526
CREATED:20200207T191640Z
LAST-MODIFIED:20200207T192906Z
UID:10000385-1586955600-1586966400@research.wsu.edu
SUMMARY:NCBI Functional Genomics Workshop - 1p-4p
DESCRIPTION:NCBI Resources for Animal and Plant Genomics Research \nThis workshop focuses on NCBI’s web-based resources for accessing and analyzing genome assemblies and annotation data\, with an emphasis on non-human organisms. You will learn which databases at NCBI best meet your needs\, including Genome\, Assembly\, BioProject\, Taxonomy\, Gene\, and SRA. We will also briefly discuss NCBI’s analysis and stand-alone tools\, such as the Genome Data Viewer (GDV)\, SRA Toolkit and Magic-BLAST.In this workshop you will learn how to: \n\n\n\nFind\, view and download the latest genome assembly data\nAccess and download annotation data for genes\, transcripts and proteins\nFind gene-specific information\, including genomic context\, orthologs and literature\nUse GDV to visualize both NCBI and external data (Track Hubs or your own data).\n\n\n\nRSVP and learn about other sessions at: https://research.wsu.edu/advancement/ncbi-workshop/
URL:https://research.wsu.edu/advancement/event/ncbi-animal-plant/
LOCATION:Holland Terrell Library 20E
CATEGORIES:Workshops and Seminars
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20200415T090000
DTEND;TZID=America/Los_Angeles:20200415T120000
DTSTAMP:20260418T083526
CREATED:20200207T191240Z
LAST-MODIFIED:20200207T192319Z
UID:10000386-1586941200-1586952000@research.wsu.edu
SUMMARY:NCBI Functional Genomics Workshop - 9a-12p
DESCRIPTION:An Update on NCBI BLAST and Other Sequence Analysis Tools \nThis workshop highlights new displays and features and introduces best practices for use of NCBI BLAST services. You will learn when and how to use important but often misunderstood aspects of the BLAST programs\, specialized services\, and databases. You will explore other important sequence analysis services\, including Primer BLAST\, an oligonucleotide primer designer and specificity checker\, and COBALT\, a multiple protein sequence alignment tool. Finally\, you will see brief demonstrations of standalone BLAST and related tools\, including SRA-Toolkit BLAST and Magic-BLAST.Specifically\, you will learn to: \n\nSelect the correct NCBI alignment tool for your task\nChoose the best BLAST database for your search goal\nUnderstand and use the new BLAST results page\, output formats and statistics\nDisplay BLAST results in genomic context using graphical displays\nAnalyze nucleotide primers: design\, check the specificity\, and display primer alignments\nAssess the taxonomic distribution of your BLAST matches and use the TreeViewer display to visualize relationships\nUse standalone BLAST\, Magic-BLAST and SRA-BLAST to search local databases and remote database on the NCBI server\n\n  \nRSVP and learn about other sessions at: https://research.wsu.edu/advancement/ncbi-workshop/
URL:https://research.wsu.edu/advancement/event/ncbi-blast/
LOCATION:Holland Terrell Library 20E
CATEGORIES:Workshops and Seminars
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